SpLip - Lipoprotein computational prediction in spirochetal genomes

SpLip is a program that predicts lipoproteins in spirochetal genomes. This page provides supplemental information for the paper that describes the program and its results. The paper is:

J. C. Setubal, M. Reis, J. Matsunaga and D. A. Haake. Lipoprotein computational prediction in spirochaetal genomes. Microbiology (2006) 152: 113-121.

If you have questions or comments about this site please write to J. C. Setubal at setubal --atsign-- vbi --dotsign-- vt --dotsign-- edu

Supplemental figures: False positive rates and false positive sequence analysis

SpLip: the program (tar file, gzipped)

Lipoprotein tables:

Table COP (Leptospira interrogans serovar copenhageni).

Table LAI (Leptospira interrogans serovar lai).

Table TP (Treponema pallidum).

Table TD (Treponema denticola).

Table BB (Borrelia burgdorferi).

Table BG (Borrelia garinii).

Other tables:

Table FEATURES.

Table TS - Training Set (with 28 sequences).

Table CYTO.

Table AACOUNTS. (predicted probables and possibles).

Table AACOUNTS_PROB. (predicted probables only).